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--- aree:proteomica:ms:bibliografia [2017/02/16 16:45]
Gianluca Frustagli Nuova edizione
+++ aree:proteomica:ms:bibliografia [2017/11/09 10:30] (versione attuale)
Federica Fratini [Sub-Proteomes, Extra-cellular vesicles and membrane microdomains]
@@ Linea 1: / Linea 1: @@
-~~NOTOC~~
 **Area Proteomica**
 ====== MassSpec ======
-<wrap button>[[:aree:proteomica:ms:richiesta|Richiesta servizio]] [[:aree:proteomica:ms:linee_guida|Linee guida]] [[:aree:proteomica:ms:protocolli|Protocolli]] [[:aree:proteomica:ms:bibliografia|Bibliografia]] [[:aree:proteomica:ms:faq|FAQ]] [[:aree:proteomica:ms:chi_siamo|Chi siamo]]</wrap>
+<WRAP tabs>
+  * [[:aree:proteomica:ms:richiesta|Richiesta servizio]]
+  * [[:aree:proteomica:ms:linee_guida|Linee guida]]
+  * [[:aree:proteomica:ms:protocolli|Protocolli]]
+  * [[:aree:proteomica:ms:bibliografia|Bibliografia]]
+  * [[:aree:proteomica:ms:link_tutorial|Link & Tutorial]]
+  * [[:aree:proteomica:ms:faq|FAQ]]
+</WRAP>
-===== Bibliografia =====
+===== BIBLIOGRAFIA =====
+===== Sub-Proteomes, Exosomes and membrane microdomains =====
-==== Sub-Proteomes and membrane microdomains ====
+[[https://www.ncbi.nlm.nih.gov/pubmed/28288760|Isolation and characterization of exosomes derived from fertile sheep hydatid cysts.]] \\
+Siles-Lucas M, Sánchez-Ovejero C, González-Sánchez M, González E, Falcón-Pérez JM, Boufana B, Fratini F, Casulli A, Manzano-Román R. \\
+<wrap lo>Vet Parasitol. 2017 Mar 15;236:22-33. doi: 10.1016/j.vetpar.2017.01.022. Epub 2017 Jan 23.</wrap>
 [[https://www.ncbi.nlm.nih.gov/pubmed/24045696|Proteomic analysis of detergent-resistant membrane microdomains in trophozoite blood stage of the human malaria parasite Plasmodium falciparum.]] \\
@@ Linea 20: / Linea 30: @@
-==== Biomarkers ====
+===== Biomarkers =====
 [[https://www.ncbi.nlm.nih.gov/pubmed/22855863|Increased levels of acute-phase inflammatory proteins in plasma of patients with sporadic CJD.]] \\
@@ Linea 31: / Linea 41: @@
-==== Protein – protein interaction ====
+===== Quantitative proteomics: Label free =====
+[[https://www.ncbi.nlm.nih.gov/pubmed/28798222|An Integrated Approach to Explore Composition and Dynamics of Cholesterol-rich Membrane Microdomains in Sexual Stages of Malaria Parasite.]] \\
+Fratini F, Raggi C, Sferra G, Birago C, Sansone A, Grasso F, Curr C, Olivieri A, Pace T, Mochi S, Picci L, Ferreri C, Di Biase A, Pizzi E, Ponzi M. \\
+<wrap lo>Mol Cell Proteomics. 2017 Oct;16(10):1801-1814. doi: 10.1074/mcp.M117.067041. Epub 2017 Aug 10.</wrap>
+[[https://www.ncbi.nlm.nih.gov/pubmed/26675863|Mass spectrometry detection of fraudulent use of cow whey in water buffalo, sheep, or goat Italian ricotta cheese.]] \\
+Camerini S, Montepeloso E, Casella M, Crescenzi M, Marianella RM, Fuselli F. \\
+<wrap lo>Food Chem. 2016 Apr 15;197 Pt B:1240-8. doi: 10.1016/j.foodchem.2015.11.073.</wrap>
+===== Protein identification from 2D gel spot - Immunoproteomics =====
+[[https://www.ncbi.nlm.nih.gov/pubmed/27213890|Anti-GAPDH Autoantibodies as a Pathogenic Determinant and Potential Biomarker of Neuropsychiatric Diseases.]] \\
+Delunardo F, Soldati D, Bellisario V, Berry A, Camerini S, Crescenzi M, Alessandri C, Conti F, Ceccarelli F, Francia A, Valesini G, Cirulli F, Siracusano A, Siracusano A, Niolu C, Alex Rubino I, Ortona E, Margutti P. \\
+<wrap lo>Arthritis Rheumatol. 2016 Nov;68(11):2708-2716. doi: 10.1002/art.39750.</wrap>
+[[https://www.ncbi.nlm.nih.gov/pubmed/25623267|Autoantibodies specific to D4GDI modulate Rho GTPase mediated cytoskeleton remodeling and induce autophagy in T lymphocytes.]] \\
+Barbati C, Alessandri C, Vomero M, Vona R, Colasanti T, Vacirca D, Camerini S, Crescenzi M, Pendolino M, Truglia S, Conti F, Garofalo T, Sorice M, Pierdominici M, Valesini G, Malorni W, Ortona E. \\
+<wrap lo>See comment in PubMed Commons belowJ Autoimmun. 2015 Apr;58:78-89. doi: 10.1016/j.jaut.2015.01.005. Epub 2015 Jan 24.</wrap>
+[[https://www.ncbi.nlm.nih.gov/pubmed/23663103|Streptococcal-vimentin cross-reactive antibodies induce microvascular cardiac endothelial proinflammatory phenotype in rheumatic heart disease.]] \\
+Delunardo F, Scalzi V, Capozzi A, Camerini S, Misasi R, Pierdominici M, Pendolino M, Crescenzi M, Sorice M, Valesini G, Ortona E, Alessandri C. \\
+<wrap lo>Clin Exp Immunol. 2013 Sep;173(3):419-29. doi: 10.1111/cei.12135.</wrap>
+[[https://www.ncbi.nlm.nih.gov/pubmed/22222975|An insight into the abundant proteome of 46BR.1G1 fibroblasts deficient of DNA ligase I.]] \\
+Giuliano S, Iadarola P, Leva V, Montecucco A, Camerini S, Crescenzi M, Salvini R, Bardoni A. \\
+<wrap lo>Electrophoresis. 2012 Jan;33(2):307-15. doi: 10.1002/elps.201100332.</wrap>
+[[https://www.ncbi.nlm.nih.gov/pubmed/21984412|Phosphorylation of SRSF1 is modulated by replicational stress.]] \\
+Leva V, Giuliano S, Bardoni A, Camerini S, Crescenzi M, Lisa A, Biamonti G, Montecucco A. \\
+<wrap lo>Nucleic Acids Res. 2012 Feb;40(3):1106-17. doi: 10.1093/nar/gkr837.</wrap>
+===== Protein – protein interaction =====
 [[https://www.ncbi.nlm.nih.gov/pubmed/27512140|The telomeric protein AKTIP interacts with A- and B-type lamins and is involved in regulation of cellular senescence.]] \\
@@ Linea 58: / Linea 102: @@
-==== Post translational modifications (PTM) ====
+===== Post translational modifications (PTM) =====
 [[https://www.ncbi.nlm.nih.gov/pubmed/25948553|Src inhibitors modulate frataxin protein levels.]] \\
@@ Linea 89: / Linea 133: @@
-==== Protein adducts and protein-drug interaction ====
+===== Protein adducts and protein-drug interaction =====
+[[https://www.ncbi.nlm.nih.gov/pubmed/28366863|Proteomic and functional analyses reveal pleiotropic action of the anti-tumoral compound NBDHEX in Giardia duodenalis.]] \\
+Camerini S, Bocedi A, Cecchetti S, Casella M, Carbo M, Morea V, Pozio E, Ricci G, Lalle M. \\
+<wrap lo>Int J Parasitol Drugs Drug Resist. 2017 Aug;7(2):147-158. doi: 10.1016/j.ijpddr.2017.03.006. Epub 2017 Mar 29.</wrap>
 [[https://www.ncbi.nlm.nih.gov/pubmed/26082764|The FAD-dependent glycerol-3-phosphate dehydrogenase of Giardia duodenalis: an unconventional enzyme that interacts with the g14-3-3 and it is a target of the antitumoral compound NBDHEX.]] \\
@@ Linea 100: / Linea 148: @@
-==== Protein identification from 2D gel spot - Immunoproteomics ====
+===== Protein redox state characterization =====
-[[https://www.ncbi.nlm.nih.gov/pubmed/27213890|Anti-GAPDH Autoantibodies as a Pathogenic Determinant and Potential Biomarker of Neuropsychiatric Diseases.]] \\
-Delunardo F, Soldati D, Bellisario V, Berry A, Camerini S, Crescenzi M, Alessandri C, Conti F, Ceccarelli F, Francia A, Valesini G, Cirulli F, Siracusano A, Siracusano A, Niolu C, Alex Rubino I, Ortona E, Margutti P. \\
-<wrap lo>Arthritis Rheumatol. 2016 Nov;68(11):2708-2716. doi: 10.1002/art.39750.</wrap>
-[[https://www.ncbi.nlm.nih.gov/pubmed/25623267|Autoantibodies specific to D4GDI modulate Rho GTPase mediated cytoskeleton remodeling and induce autophagy in T lymphocytes.]] \\
-Barbati C, Alessandri C, Vomero M, Vona R, Colasanti T, Vacirca D, Camerini S, Crescenzi M, Pendolino M, Truglia S, Conti F, Garofalo T, Sorice M, Pierdominici M, Valesini G, Malorni W, Ortona E. \\
-<wrap lo>See comment in PubMed Commons belowJ Autoimmun. 2015 Apr;58:78-89. doi: 10.1016/j.jaut.2015.01.005. Epub 2015 Jan 24.</wrap>
-[[https://www.ncbi.nlm.nih.gov/pubmed/23663103|Streptococcal-vimentin cross-reactive antibodies induce microvascular cardiac endothelial proinflammatory phenotype in rheumatic heart disease.]] \\
-Delunardo F, Scalzi V, Capozzi A, Camerini S, Misasi R, Pierdominici M, Pendolino M, Crescenzi M, Sorice M, Valesini G, Ortona E, Alessandri C. \\
-<wrap lo>Clin Exp Immunol. 2013 Sep;173(3):419-29. doi: 10.1111/cei.12135.</wrap>
-[[https://www.ncbi.nlm.nih.gov/pubmed/22222975|An insight into the abundant proteome of 46BR.1G1 fibroblasts deficient of DNA ligase I.]] \\
-Giuliano S, Iadarola P, Leva V, Montecucco A, Camerini S, Crescenzi M, Salvini R, Bardoni A. \\
-<wrap lo>Electrophoresis. 2012 Jan;33(2):307-15. doi: 10.1002/elps.201100332.</wrap>
-[[https://www.ncbi.nlm.nih.gov/pubmed/21984412|Phosphorylation of SRSF1 is modulated by replicational stress.]] \\
-Leva V, Giuliano S, Bardoni A, Camerini S, Crescenzi M, Lisa A, Biamonti G, Montecucco A. \\
-<wrap lo>Nucleic Acids Res. 2012 Feb;40(3):1106-17. doi: 10.1093/nar/gkr837.</wrap>
-==== Protein redox state characterization ====
 [[https://www.ncbi.nlm.nih.gov/pubmed/24925315|Gaucher disease due to saposin C deficiency is an inherited lysosomal disease caused by rapidly degraded mutant proteins.]] \\
@@ Linea 134: / Linea 159: @@
-==== Quantitative proteomics: Label free ====
+===== Proteomics Review =====
-[[https://www.ncbi.nlm.nih.gov/pubmed/26675863|Mass spectrometry detection of fraudulent use of cow whey in water buffalo, sheep, or goat Italian ricotta cheese.]] \\
-Camerini S, Montepeloso E, Casella M, Crescenzi M, Marianella RM, Fuselli F. \\
-<wrap lo>Food Chem. 2016 Apr 15;197 Pt B:1240-8. doi: 10.1016/j.foodchem.2015.11.073.</wrap>
-==== Proteomics Review ====
 [[https://www.ncbi.nlm.nih.gov/pubmed/25618357|The role of protein and peptide separation before mass spectrometry analysis in clinical proteomics.]] \\
 Camerini S, Mauri P. \\
 <wrap lo>J Chromatogr A. 2015 Feb 13;1381:1-12. doi: 10.1016/j.chroma.2014.12.035. Review.</wrap>